PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009600052.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 176aa    MW: 20349.9 Da    PI: 7.6262
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009600052.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM53.29.9e-1771362128
             NAM   2 ppGfrFhPtdeelvveyLkkkvegkk.leleev.ikevdiy.kvePwdLpk....kvkaeekew..yfFskrdkkyatgkrknr.atksgyWkat 86 
                       GfrF+P+d+e ++ +L + v g++  ++  +  ++vd+y k ePw++ +    + + e+++   +f +k +k + ++ r +r + ++g Wk+ 
  XP_009600052.1   7 EEGFRFRPKDSEGLT-FLLRFVVGQEmYDA-GFiTTNVDVYgKQEPWEIYEhgvpCGDDEDSSSypHFITKLKK-K-SNARYHRaVGNKGSWKQD 97 
                     68***********95.56666666661555.5526778*99456*****7335543333444442345444444.4.45788884677******* PP

             NAM  87 gkdkevlskkgelvglkktLvfykg..rapkgektdWvmheyrl 128
                      k k++++     +g k+ L + ++    ++ +  +W+m+ey+l
  XP_009600052.1  98 AKGKPMVN-----IGSKTNLSYKNKefYPEDQKDGHWLMKEYEL 136
                     ******99.....66666666653321244445679******97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019414.05E-153157IPR003441NAC domain
PROSITE profilePS5100519.2726159IPR003441NAC domain
PfamPF023651.8E-118136IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 176 aa     Download sequence    Send to blast
MGHLELEEGF RFRPKDSEGL TFLLRFVVGQ EMYDAGFITT NVDVYGKQEP WEIYEHGVPC  60
GDDEDSSSYP HFITKLKKKS NARYHRAVGN KGSWKQDAKG KPMVNIGSKT NLSYKNKEFY  120
PEDQKDGHWL MKEYELSKVI LHKFDQDCRD YVLCAIKKLK HVNSSSETST ITTLNN
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009600052.11e-131PREDICTED: NAC domain-containing protein 78-like, partial
TrEMBLM1D2T57e-66M1D2T5_SOLTU; Uncharacterized protein
STRINGPGSC0003DMT4000799902e-65(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA22191254
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04070.22e-10NAC domain containing protein 47